GUT MICROBIOME SIMULATION

About 90% of the body’s serotonin is made in the gut rather than the brain, and the bacteria living there deserve part of the credit. The more fibre arrives, the harder the beneficial species ferment, the more short-chain fatty acids they release and the lower the inflammation, because SCFAs are what feed the cells of the gut wall. Broad-spectrum antibiotics wipe out helpful and harmful strains alike, so diversity falls off a cliff, which is precisely when opportunistic species move into the vacancy. Probiotics seed the community back quickly, while fibre feeds the native one and lasts longer.

▸ Seeding a thousand-species community into the gut…
▸ Enabling fibre fermentation → SCFAs
▸ Balancing beneficial ↔ harmful bacteria
▸ Linking the gut–brain axis & immunity
▸ Ready — Online. ✅
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⌂ Cells & Genetics

Simulation room Gut microbiome

Gut Microbiome
Online
balance · dysbiosis
Microbial community
🦠 Gut
high diversity + beneficial dominance = healthy
Bacteria count—
Species diversity—
Beneficial bacteria—
SCFA—
Inflammation—
Status—
Note
The gut holds trillions of bacteria across thousands of species. Beneficial bacteria ferment fibre → SCFAs feed the gut cells, train immunity, and competitively exclude pathogens. Imbalance (dysbiosis) → inflammation and poor digestion.
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Adjust fibre in the right column · switch scenarios (antibiotics · probiotics · dysbiosis…) · watch the population & inflammation change · click a concept for details
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Beneficial-bacteria share & inflammation over time beneficialinflammation
About Microbiome

About 90% of the body’s serotonin is made in the gut rather than the brain, and the bacteria living there deserve part of the credit. The more fibre arrives, the harder the beneficial species ferment, the more short-chain fatty acids they release and the lower the inflammation, because SCFAs are what feed the cells of the gut wall. Broad-spectrum antibiotics wipe out helpful and harmful strains alike, so diversity falls off a cliff, which is precisely when opportunistic species move into the vacancy. Probiotics seed the community back quickly, while fibre feeds the native one and lasts longer.

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